cascade

Causality-Aware Single-Cell Adaptive Discover/Deduction/Design Engine

Submodules

core

Core pytorch lightning module and training callbacks for the CASCADE model

data

Dataset processing utilities and data loaders

graph

Utilities for manipulating causal graphs

metrics

Metrics for evaluating the accuracy of inferred causal structures

model

API entrypoint of the CASCADE model

nn

Neural network utilities

plot

Plotting utilities

sim

Simulation functions

typing

Type definitions

utils

Miscellaneous utilities